miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|86092365|gb|BB903574.1|BB903574 GTCTACCTCTTCCATAAACGGCTTTAGTCTTTCTTCTTTGTCACATGCCAAAACTTCTATCAAGAAAACTACATTGAGAC
CCTTTGCATCTCTTAACTCTTCTTCTTCCTCTTCATCTTCTAATTTCCCTTCTCTTATTCAAGACAAACCTGTTTTTGCT
TCCTCTTCTCCTTTCATCACTCCAATTTTGAGAGAAGAAATGGGAAAGGGTTATGAAGAAGCAATTCAAGAACTCGAGAA
ATTGTTGAGGGAGAAGGCCGACTTGAAAGCCACAGCAGCTGAAAAGGTTGAACAAATAACAGCTCAACTTGGATCAGTTA
CAGCTCAAGCTGCAACACCATCATCATCTGATGGCATTCCAACATCTGAAGCCTCAGAGAGGATCAAAACTGGTTTCATT
CACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAAAGCCCCCCGTATATGGT
GTTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGATTTCCAGCCAGGAGAAGCTTTTGTGGTCAGAAATG
TTGCTAACTTGGTTCCACCATA




Most similar to sp|P17067|CAHC_PEA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum
           sativum PE=1 SV=1
          Length = 328

 Score =  263 bits (672), Expect = 6e-70
 Identities = 139/180 (77%), Positives = 147/180 (81%), Gaps = 2/180 (1%)
 Frame = +2

Query: 47  AKTSIKKTTLRXXXXXXXXXXXXXXXXXXX--IQDKPVFASSSPFITPILREEMGKGYEE 220
           AKTS K+TTLR                     IQDKPVFASSSP ITP+LREEMGKGY+E
Sbjct: 17  AKTSTKRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEMGKGYDE 76

Query: 221 AIQELEKLLREKADLKATAAEKVEQITAQLGSVTAQAATPSSSDGIPTSEASERIKTGFI 400
           AI+EL+KLLREK +LKATAAEKVEQITAQLG       T SSSDGIP SEASERIKTGF+
Sbjct: 77  AIEELQKLLREKTELKATAAEKVEQITAQLG-------TTSSSDGIPKSEASERIKTGFL 129

Query: 401 HFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPP 580
           HFKKEKYDKNPALYGELAKGQSPP+MVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPP
Sbjct: 130 HFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPP 189